EATRIS’ contribution to research findings

Here is a list of publications citing EATRIS from July to September (Q3) 2023

Quartet RNA reference materials improve the quality of transcriptomic data through ratio-based profiling

Authors: Yu, Y;Hou, W;Liu, Y;Wang, H;Dong, L;Mai, Y;Chen, Q;Li, Z;Sun, S;Yang, J;Cao, Z;Zhang, P;Zi, Y;Liu, R;Gao, J;Zhang, N;Li, J;Ren, L;Jiang, H;Shang, J;Zhu, S;Wang, X;Qing, T;Bao, D;Li, B;Li, B;Suo, C;Pi, Y;Wang, X;Dai, F;Scherer, A;Mattila, P;Han, J;Zhang, L;Jiang, H;Thierry-Mieg, D;Thierry-Mieg, J;Xiao, W;Hong, H;Tong, W;Wang, J;Li, J;Fang, X;Jin, L;Xu, J;Qian, F;Zhang, R;Shi, L;Zheng, Y;

Year: 2023

Journal: Nature biotechnology

DOI: 10.1038/s41587-023-01867-9

A gut-restricted glutamate carboxypeptidase II inhibitor reduces monocytic inflammation and improves preclinical colitis

Authors: Peters, DE;Norris, LD;Tenora, L;Šnajdr, I;Ponti, AK;Zhu, X;Sakamoto, S;Veeravalli, V;Pradhan, M;Alt, J;Thomas, AG;Majer, P;Rais, R;McDonald, C;Slusher, BS;

Year: 2023

Journal: Science translational medicine

DOI: 10.1158/1538-7445.am2023-350

P15.04.A Biological Correlates Of Leakage Effect Metrics Computed From Dynamic Sage-Epi Mri In Enhancing And Non-Enhancing Human Gliomas

Authors: Sanvito, F;Raymond, C;Cho, N;Yao, J;Hagiwara, A;Orpilla, J;Liau, L;Everson, R;Nghiemphu, P;Lai, A;Prins, R;Salamon, N;Cloughesy, T;Ellingson, B;

Year: 2023

Journal: Neuro-Oncology

DOI: 10.1093/neuonc/noad137.368

P12.13.B Fibroblast Activation Protein As A Potential Theranostic Target In Brain Metastases Of Diverse Solid Tumours

Authors: Vymolova, B;Zubal, M;Matrasova, I;Vymola, P;Veprkova, J;Syrucek, M;Tomas, R;Vanickova, Z;Krepela, E;Konecna, D;Busek, P;Sedo, A;

Year: 2023

Journal: Neuro-Oncology

DOI: 10.1093/neuonc/noad137.332

P12.08.A Cell-Extrinsic D-2-Hydroxyglutarate Promotes Hypermethylation At Lineage-Specific Regulatory Regions To Prevent Microglial Activation In IDH-Mutant Gliomas

Authors: Laurenge, A;Pugliese, P;Richard, Q;Picca, A;Jouannet, S;Labreche, K;Bielle, F;Iavarone, A;Ceccarelli, M;Mallat, M;Sanson, M;Castro-Vega, L;

Year: 2023

Journal: Neuro-Oncology

DOI: 10.1093/neuonc/noad137.327

P12.06.A Pericyte-Like Cells Expressing Fibroblast Activation Protein Are Main Producers Of Fibrillar Extracellular Matrix In Glioblastoma

Authors: Vymola, P;Garcia-Borja, E;Cervenka, J;Balaziova, E;Vymolova, B;Vodicka, P;Busek, P;Sedo, A;

Year: 2023

Journal: Neuro-Oncology

DOI: 10.1093/neuonc/noad137.325

Cell-free DNA approaches for cancer early detection and interception

Authors: Medina, JE;Dracopoli, NC;Bach, PB;Lau, A;Scharpf, RB;Meijer, GA;Andersen, CL;Velculescu, VE;

Year: 2023

Journal: Journal for immunotherapy of cancer

DOI: 10.1136/jitc-2022-006013

A novel 3D spheroid model of rheumatoid arthritis synovial tissue incorporating fibroblasts, endothelial cells, and macrophages

Authors: Philippon, EML;van Rooijen, LJE;Khodadust, F;van Hamburg, JP;van der Laken, CJ;Tas, SW;

Year: 2023

Journal: Frontiers in immunology

DOI: 10.3389/fimmu.2023.1188835

Nucleoside-based anticancer drugs: Mechanism of action and drug resistance

Authors: Hruba, L;Das, V;Hajduch, M;Dzubak, P;

Year: 2023

Journal: Biochemical pharmacology

DOI: 10.1016/j.bcp.2023.115741

Pro-905, a novel purine antimetabolite, combines with glutamine amidotransferase inhibition to suppress growth of malignant peripheral nerve sheath tumor

Authors: Lemberg, KM;Ali, ES;Krecmerova, M;Aguilar, JMH;Alt, J;Peters, DE;Zhao, L;Wu, Y;Nuha, N;Asara, JM;Staedtke, V;Pratilas, CA;Majer, P;Rais, R;Ben-Sahra, I;Slusher, BS;

Year: 2023

Journal: Molecular cancer therapeutics

DOI: 10.1158/1535-7163.MCT-23-0258

The adenylate cyclase toxin RTX domain follows a series templated folding mechanism with implications for toxin activity

Authors: Chen, G;Wang, H;Bumba, L;Masin, J;Sebo, P;Li, H;

Year: 2023

Journal: The Journal of biological chemistry

DOI: 10.1016/j.jbc.2023.105150

Combination of quinoxaline with pentamethinium system: Mitochondrial staining and targeting

Authors: Kejík, Z;Koubková, N;Krčová, L;Sýkora, D;Abramenko, N;Veselá, K;Kaplánek, R;Hajduch, J;Houdová Megová, M;Bušek, P;Šedo, A;Lacina, L;Smetana, K;Martásek, P;Jakubek, M;

Year: 2023

Journal: Bioorganic chemistry

DOI: 10.1016/j.bioorg.2023.106816

CD64 as novel molecular imaging marker for the characterization of synovitis in rheumatoid arthritis

Authors: Theeuwes, WF;Di Ceglie, I;Dorst, DN;Blom, AB;Bos, DL;Vogl, T;Tas, SW;Jimenez-Royo, P;Bergstrom, M;Cleveland, M;van der Kraan, PM;Laverman, P;Koenders, MI;van Lent, PL;van den Bosch, MHJ;

Year: 2023

Journal: Arthritis research & therapy

DOI: 10.1186/s13075-023-03147-y

Clinical Blood Metabogram: Application to Overweight and Obese Patients

Authors: Lokhov, PG;Balashova, EE;Trifonova, OP;Maslov, DL;Plotnikova, OA;Sharafetdinov, KK;Nikityuk, DB;Tutelyan, VA;Ponomarenko, EA;Archakov, AI;

Year: 2023

Journal: Metabolites

DOI: 10.3390/metabo13070798

Comprehensive Mechanistic View of the Hydrolysis of Oxadiazole-Based Inhibitors by Histone Deacetylase 6 (HDAC6)

Authors: Motlová, L;Šnajdr, I;Kutil, Z;Andris, E;Ptáček, J;Novotná, A;Nováková, Z;Havlínová, B;Tueckmantel, W;Dráberová, H;Majer, P;Schutkowski, M;Kozikowski, A;Rulíšek, L;Bařinka, C;

Year: 2023

Journal: ACS chemical biology

DOI: 10.1021/acschembio.3c00212

Together4RD position statement on collaboration between European reference networks and industry

Authors: Hedley, V;Bolz-Johnson, M;Hernando, I;Kenward, R;Nabbout, R;Romero, C;Schaefer, F;Upadhyaya, S;Together4RD Steering Group, ;

Year: 2023

Journal: Orphanet journal of rare diseases

DOI: 10.1186/s13023-023-02853-9

A thermosensitive gel matrix for bioreactor-assisted in-cell NMR of nucleic acids and proteins

Authors: Dzurov, M;Pospíšilová, Š;Krafčíková, M;Trantírek, L;Vojtová, L;Ryneš, J;

Year: 2023

Journal: Journal of biomolecular NMR

DOI: 10.1007/s10858-023-00422-7

Improved syntheses of P2X7 ligands based on substituted benzyl amide of pyroglutamic acid motif labelled with iodine-123 or iodine-125

Authors: Marešová, A;Jurášek, M;Zimmermann, T;Drašar, P;Petřík, M;Džubák, P;Lindegren, S;Cumming, P;Pichler, R;Popkov, A;

Year: 2023

Journal: Journal of Radioanalytical and Nuclear Chemistry

DOI: 10.1007/s10967-023-09081-2

Current aspects in biobanking for personalized oncology investigations and treatments

Authors: Policiuc, L;Nutu, A;Zanoaga, O;Mehterov, N;Braicu, C;Berindan-Neagoe, I;

Year: 2023

Journal: Medicine and pharmacy reports

DOI: 10.15386/mpr-2647

Novel Lipophilic Hydroxamates Based on Spirocarbocyclic Hydantoin Scaffolds with Potent Antiviral and Trypanocidal Activity

Authors: Pardali, V;Giannakopoulou, E;Mpekoulis, G;Tsopela, V;Panos, G;Taylor, MC;Kelly, JM;Vassilaki, N;Zoidis, G;

Year: 2023

Journal: Journal of biomolecular NMR

DOI: 10.3390/ph16071046

Novel Distributed Informatics Platform to Support Machine Learning Discovery of Metabolic Biomarkers in Hypoxia Predisposition

Authors: Stell, A;Chauhan, V;Amador, S;Beuschlein, F;Favier, J;Gil, D;Greenwood, P;de Krijger, R;Kroiss, M;Ortuno, S;Patocs, A;Walch, A;

Year: 2023

Proceedings of the 16th International Joint Conference on Biomedical Engineering Systems and Technologies

DOI: 10.5220/0011665100003414

Generalized Rash in Severe Hospitalized COVID Patients: Correlation between Histological Examination, Drug Intake, Blood Interleukins Profileand Long-Term Follow-Up

Authors: Fernández-Guarino, M;Stewart, V;Fernández-Nieto, D;Moreno Garcia del Real, C;Gonzalez de Olano, D;Blanco, C;Solano-Solares, E;De la Hoz Caballer, B;Martínez-Botas, J;Garcia-Bermejo, M;Andrés-Martín, A;

Year: 2023

Preprint platform: Preprint

DOI: 10.20944/preprints202309.1665.v1

Differential seeding by exogenous R2 and R3 fibrils influences autophagic degradation of intracellular tau aggregates in Tau K18 P301S cells

Authors: Annadurai, N;Kubíčková, A;Frydrych, I;Hajdúch, M;Das, V;

Year: 2023

Preprint platform: bioRxiv

DOI: 10.1101/2023.08.26.554940

ClairS: a deep-learning method for long-read somatic small variant calling

Authors: Zheng, Z;Su, J;Chen, L;Lee, Y;Lam, T;Luo, R;

Year: 2023

Preprint platform: bioRxiv

DOI: 10.1101/2023.08.17.553778

Improving trial conduct for late-phase, randomised clinical trials that utilise innovative trial designs and platforms

Author: Noor, N;

Year: 2023

Thesis

La influencia de la comunidad científica en el proceso de creación y puesta en marcha de megaproyectos científicos en México. El caso del Gran Telescopio Milimétrico Alfonso Serrano y el Observatorio de Rayos Gamma HAWC

Author: Resendiz Garcia, NM;

Year: 2023

Thesis

Význam a uplatnění biobankování v biomedicínském výzkumu

Author: Jochmanova, EMA

Year: 2023

Thesis

D7. 3 Protocol for a Longitudinal Natural History Study (LNHS) in NF

Authors: Hoogendijk, W;Parke, T;Spiertz, C;

Year: 2023

Thesis

D7. 6 NF Specific Report on Regulatory and Ethics Consultation

Authors: Dhaenens, B;Oostenbrink, R;Kirk, G;Penna, SH;

Year: 2023

Thesis

D7. 5 Operational Plan for the implementation of the NF IRP

Authors: Bakker, A;Oostenbrink, R;Dhaenens, B;Parke, T;

Year: 2023

Thesis

DiSSCo Prepare Deliverable D4. 3-Report on recommendations for the most suitable model

Authors: Landel, S;Lymer, G;Pasterk, M;Guiraud, M;Worley, K;

Year: 2023

Thesis

Umbrella Data Management Plans to Integrate FAIR Data : Lessons From the ISIDORe and BY-COVID Consortia for Pandemic Preparedness

Authors: Romain, D; Wittner, R; Buono, R.A; Marsh, S.A;Goble, C;Houde, M;Kemmer, I;Keppler, A;

Year: 2023

zonmw.nl

ReferentNÚM. 20

Authors: EL PACTE, PERALAS;

Year: 2023

Book

EOSC-Life Report on the work of the Open Call Projects

Authors: Rybina, A;(), PA;Pfander, C;Batut, B;Beracochea, M;Bischof, J;Bottländer, M;(), IB;(), JB;(), IC;Carazo, JM;Castillo-Rutz, N;(, ML;), ;Clark-Casey, J;(), YC;Comerci, M;(), FC;Corre, E;Cox, C;Crockett, S;(), RD;De-Moro, G;De Rochefort, L;Eguinoa, I;Exter, K;Ewbank, J;Finn, R;García-Granero, J;Goble, C;Gormanns, P;Grantner, T;Gribbon, P;Grüning, B;Guevara, M;Gurwitz, K;Haley, N;Harmse, H;Hekkelman, M;Henger, A;Heriche, J;Holub, P;Houde, M;Joosten, RP;Juty, N;Karnbach, G;Karoune, E;Kensche, PR;Keppler, A;Kerfant, C;Krajiczek, M;Lancelotti, C;Leitner, F;Leo, S;Longo, D;Ludwig, R;Madella, M;Madrigal, P;Magliulo, M;Mangin, J;Manning, J;Marquez, J;Matser, V;Matteoni, R;Mayrhofer, M;Miksa, T;Moreno, P;Nasr, E;Newhouse, S;Ninidakis, S;Pade, N;Pafilis, E;Panagiotopoulou, M;Papatheodorou, I;Parkinson, H;Pavloudi, C;Perrakis, A;Perseil, I;Pireddu, L;Popper, N;Potirakis, A;Povey, M;Rauber, A;Romano, P;Rosato, A;Ruiz-Pérez, J;Schneider-Lunitz, V;Sakharova, E;Seyfarth, R;Soiland-Reyes, S;Solovyev, A;Spinazzola, E;Strubel, P;Swedlow, J;Taverner, E;Twardziok, S;Velankar, S;Vignaud, A;Wagener, H;Weise, M;Wienk, H;Winkler, D;Zafeiropoulos, H;Zaliani, A;Zullino, S;Schmidt-Tremmel, F;Blomberg, N;

Year: 2023

EOSC-Life Report

How can we make translational research by design the norm for Europe? Findings from a co-convened workshop in Brussels, April 2023

Author: Lombardo, G;

Year: 2023

F1000Research

 

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